PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA57241.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family GATA
Protein Properties Length: 340aa    MW: 35493.4 Da    PI: 7.5324
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA57241.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA55.11e-17221255135
        GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                 C +C t kTp+WR gp g+ktLCnaCG++y++ +l
  PKA57241.1 221 CLHCATNKTPQWRAGPMGPKTLCNACGVRYKSGRL 255
                 99*****************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 340 aa     Download sequence    
MEAQAYFQGW HNRSGFPQSA TDKQGMGNGE HFIVEELLDL SNEEEEGIGI TAGEYGGYAA  60
VAGLSSGAGS STVTAIESRN KSSTAVESVA AAGFSGDIFE PYADLAELEW LSNFVEESFS  120
SDEMRKLGLI SGIKSTSSSS STSLGDDGVA AEPPAILPEA PRGRARSKRS RVAGPCNWSS  180
GLLPAAASSS SESDAFVIQN KPAKKKEASP ASAPASDGRK CLHCATNKTP QWRAGPMGPK  240
TLCNACGVRY KSGRLVPEYR PAASPTFVLS KHSNSHRKVL ELRRQKGFRQ QQVFLAGAAG  300
GGGGGGGGCF YKGSTAAAAA TAGDDFLTHH HLGPDFRQVI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25830.12e-48GATA family protein