PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA57274.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

MYB_related

Protein Properties

Length: 779aa MW: 87423.7 Da PI: 9.1493

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA57274.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	22.5	2.7e-07	718	772	2	47
SSS-HHHHHHHHHHHHHTTTT.....-HHHHHHHHT....TTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg.....tWktIartmg....kgRtlkqcksrwqky 47 + W +eE++ll +a +++++ +W+ I + ++Rt+ ++k++w++ PKA57274.1 718 LIWKPEEEQLLEEALLKFPKNsdgriQWTNILVYGRqvfhETRTPIDLKDKWRNM 772 56******************************99***************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 779 aa Download sequence
MATSALAWQW VVEALAGVQE ASTSVLGDLV NRVPDVLSGS SVHVRERLAL RYLEECSGMV 60 TEETPPPLDA NVPSTSASVA VIDAAQTCEE VLRQKAEKSN DIGSGNMELP VDNLHQFILL 120 KRATLLKPSV ELLKDKILGS SPHLQNSKEC NGPPSGLGPF HMNNISYESR RDHRSLKKII 180 SMKHANSWAN KLTLTRRYRK LILDREASNK QQMAEKNFTC GDKKNKQTEI ENKCNGIQVL 240 MNQEIRKMPF VKLSSSHDGD EIQHLRENSA TLAAAPDSAL EKLNGSLQPQ VQVQGALHDG 300 RADLHKEVGS GCDNGQLLKH DSMPQPYSER NICFKCGKSG QLLNCNSDDC STTIHESCLG 360 QLANFETKGS FYCPFCNYKN ALVSYRKEKR KAQQARRNMF SFYDISPLVK FPKEKRSKCM 420 DRSGQVGIHH TLNEHRDLLL RRSELRGGNS QHAENNQSSS MVDDHQISQN LQNQQSQQND 480 ISDVVCKNLS PRKGKTKCHD QHGVKRKVKD DCHQPTKGNL ASENQLDGAA DLLHQNMSTC 540 GEALARHPKH DVRDAPVKSQ SDIGRDDECS IRESEGLQPV ENIIRTSNGV LPCDRDTTCK 600 TTDVCGGRDN RKLCTDQLNL ELKYNVYADA ADQNTCSIRA NKRSSLQVKG EGDYSGKRMA 660 LASRISGSYA LRSRSVTAGK SDNHKRAVQD QKTATSPLRK RKKQCSIPKE PYGRRTKLIW 720 KPEEEQLLEE ALLKFPKNSD GRIQWTNILV YGRQVFHETR TPIDLKDKWR NMQRKRPKT

Sequence ? help Back to Top

Protein Sequence Length: 779 aa Download sequence

MATSALAWQW VVEALAGVQE ASTSVLGDLV NRVPDVLSGS SVHVRERLAL RYLEECSGMV  60
TEETPPPLDA NVPSTSASVA VIDAAQTCEE VLRQKAEKSN DIGSGNMELP VDNLHQFILL  120
KRATLLKPSV ELLKDKILGS SPHLQNSKEC NGPPSGLGPF HMNNISYESR RDHRSLKKII  180
SMKHANSWAN KLTLTRRYRK LILDREASNK QQMAEKNFTC GDKKNKQTEI ENKCNGIQVL  240
MNQEIRKMPF VKLSSSHDGD EIQHLRENSA TLAAAPDSAL EKLNGSLQPQ VQVQGALHDG  300
RADLHKEVGS GCDNGQLLKH DSMPQPYSER NICFKCGKSG QLLNCNSDDC STTIHESCLG  360
QLANFETKGS FYCPFCNYKN ALVSYRKEKR KAQQARRNMF SFYDISPLVK FPKEKRSKCM  420
DRSGQVGIHH TLNEHRDLLL RRSELRGGNS QHAENNQSSS MVDDHQISQN LQNQQSQQND  480
ISDVVCKNLS PRKGKTKCHD QHGVKRKVKD DCHQPTKGNL ASENQLDGAA DLLHQNMSTC  540
GEALARHPKH DVRDAPVKSQ SDIGRDDECS IRESEGLQPV ENIIRTSNGV LPCDRDTTCK  600
TTDVCGGRDN RKLCTDQLNL ELKYNVYADA ADQNTCSIRA NKRSSLQVKG EGDYSGKRMA  660
LASRISGSYA LRSRSVTAGK SDNHKRAVQD QKTATSPLRK RKKQCSIPKE PYGRRTKLIW  720
KPEEEQLLEE ALLKFPKNSD GRIQWTNILV YGRQVFHETR TPIDLKDKWR NMQRKRPKT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	699	703	RKRKK