PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA57276.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family bHLH
Protein Properties Length: 385aa    MW: 43832.2 Da    PI: 8.0521
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA57276.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.21.6e-09212258354
                 HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                 ++h   Er+RR+r+N +f+ L +llP+       K +K ++L k++ Y+++L
  PKA57276.1 212 KKHTVSERQRRERLNAGFHSLWQLLPPG-----SKKDKTSVLCKTMSYLNEL 258
                 679***********************95.....4999999********9998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 385 aa     Download sequence    
MCYLRLFILI FLYKQNVPFA RDWSSFSSFD DSFAGISPEE AMDLIGFGDS ELLNPSSCRL  60
QRQIDDLNML MESMEQCASL QIPQLSIEKT RSTDSIPSGF TMNPKSSTGL RNRGSDVVFK  120
ASARDEMAIT RAMLSVISSS SSSSSSSPSY LHCSRLRSQN TVKSAFQPYN SSLSPLIETR  180
QAEQNQNMIK RAHMMLRKVK RQEETEARIY QKKHTVSERQ RRERLNAGFH SLWQLLPPGS  240
KKDKTSVLCK TMSYLNELKA EVHELEEKNR VMEDRLLPTI NGPKEERIEV RIIKPLKPES  300
EEQNQIELVI MVRVKCNLIK VALHVLEFIK EMKCFSLISM DAFPQSEGLN LSATLRLETK  360
DSNWDEETFK EGASGAAYMA LMAPS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1219224RQRRER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56960.17e-21bHLH family protein