PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA57293.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family B3
Protein Properties Length: 183aa    MW: 20708.8 Da    PI: 4.4848
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA57293.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B331.72.7e-101379263
                EEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEE.TTS-EEEEEE....EEETTEEEE-T CS
          B3  2 fkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltled.esgrsWevkliy..rkksgryvltk 63
                +k+l +sdv+++gr+vlpk+ +e+h   +  +e++ l ++d e+++ W++k+++  ++ks++y+l++
  PKA57293.1 13 QKELRNSDVSSLGRIVLPKRETESHlpVLTAREGISLPMQDlETSQLWSFKFRFwpNNKSRMYILES 79
                7999***********************77888999******8888*******998888888899974 PP
Sequence ? help Back to Top
Protein Sequence    Length: 183 aa     Download sequence    
MQQLMEGLRF LLQKELRNSD VSSLGRIVLP KRETESHLPV LTAREGISLP MQDLETSQLW  60
SFKFRFWPNN KSRMYILEST AQFNGKLDSM FQVIRARKAG CQEQLLVDPM PVIEDGIFDS  120
IIPDIVVARA RYSDLYLPLA EGMNMALGMN CAFSADFSMS FLPDDGLGSS SSCMESLSLD  180
DFY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G26790.11e-32B3 family protein