PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA57309.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

WRKY

Protein Properties

Length: 227aa MW: 24668.7 Da PI: 5.7345

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA57309.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	97.1	1.2e-30	132	190	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDg++WrKYG+K++k+s++pr+YYrC+++gC+vkk+ver+ +d+++v++tYeg Hnh+ PKA57309.1 132 LDDGFKWRKYGKKPIKNSPNPRNYYRCSTEGCSVKKRVERDINDQSYVITTYEGVHNHT 190 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 227 aa Download sequence
MRQVRRPSQL MALLDVLRPF PAAMPTFFSP EEIAAGVHVS NAPLEEYPFS SLELSDYVLP 60 EDSVDQTPAV IENSASPAAP AAAFLPQSFV EAFSAPPALA AGSSSSMSLP PLPRLAEGSR 120 IAFRTKSEVD NLDDGFKWRK YGKKPIKNSP NPRNYYRCST EGCSVKKRVE RDINDQSYVI 180 TTYEGVHNHT SPGIVYYTTQ DAVSGWFLLS GCQMPGPSGT ASSSSNL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64810.1	2e-40	WRKY family protein