PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA57355.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family GRAS
Protein Properties Length: 470aa    MW: 52990.4 Da    PI: 9.764
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA57355.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS253.77.1e-78724671374
        GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaN 99 
                 l++l+l cA  v+ +dl+ a + L +l  +as +g+p++R+aayf+ +L arl+  +s l +++++++++    +eelaa+  f+ +sP+++f+h+taN
  PKA57355.1  72 LIRLILLCAASVHRRDLRTAAESLMNLYRRASLTGEPIERVAAYFADGLFARLLLPSSPLQATIAANPSP----EEELAAFAGFYYASPCYQFAHFTAN 166
                 5789999************************************************999999999888887....7999999****************** PP

        GRAS 100 qaIleavege.....ervHiiDfdisqGlQWpaLlqaLasRp...egppslRiTgvgspesgskeeleetgerLakfAeel.gvpfefnvlvakrledl 189
                 qaI++a e++       +H++D+d+s+G+QWp+L+q+L++R+   ++p sl iTg+g+    s +el++t+ rL++fA  + +++f+f+  + +  ++ 
  PKA57355.1 167 QAIMDAYEEAesfngGNLHVVDLDVSHGFQWPSLMQSLSDRAtttNKPISLSITGFGR----SLHELRQTAARLRSFAGGCsNLSFDFQGKIIRPSHSG 261
                 ********9966666778***********************99867777*********....9***************87549*******999999999 PP

        GRAS 190 eleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnse...................sFlerflealeyysalfd 269
                  l  Lr k++ +++Vn  +   ++l+++++++s    +L+++++++P++v++ve+e  + ++                    Fl rf+e+l+y++a+fd
  PKA57355.1 262 PLAVLREKKNATVVVNNLVFYLQTLKSTAEISS----TLRAIREVNPNLVILVEREDRRPEPeehltenrldgeeegggggGFLPRFMESLQYFAAMFD 356
                 9**************988777777778888887....*******************777444467888999**************************** PP

        GRAS 270 sleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrve............eesg 356
                 sl+  lpres er+ +E+  lgrei++++ +  +    r++     ++++e+  F+ v++s +a++qakll+++ + +g  +e            e++g
  PKA57355.1 357 SLNGCLPRESLERVRIEKNHLGREIREALLMGDRP-GRRTR-----EMMMERRWFEGVRMSWRAVSQAKLLVKMKS-QGSAMEhlrggarfsvweEDDG 448
                 ****************************9998887.22222.....57999999***************9999887.6666664555555555556677 PP

        GRAS 357 slv.lgWkdrpLvsvSaWr 374
                  ++ lgW++r+L++v+aWr
  PKA57355.1 449 RALsLGWQGRRLLTVTAWR 467
                 7767**************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 470 aa     Download sequence    
MQQTEVSGDL PSLSLSLGGR GTSSYHADPS LKHRKRKREQ YDRRSRAKHL LRARNCMMRR  60
CSNEFDGKGH LLIRLILLCA ASVHRRDLRT AAESLMNLYR RASLTGEPIE RVAAYFADGL  120
FARLLLPSSP LQATIAANPS PEEELAAFAG FYYASPCYQF AHFTANQAIM DAYEEAESFN  180
GGNLHVVDLD VSHGFQWPSL MQSLSDRATT TNKPISLSIT GFGRSLHELR QTAARLRSFA  240
GGCSNLSFDF QGKIIRPSHS GPLAVLREKK NATVVVNNLV FYLQTLKSTA EISSTLRAIR  300
EVNPNLVILV EREDRRPEPE EHLTENRLDG EEEGGGGGGF LPRFMESLQY FAAMFDSLNG  360
CLPRESLERV RIEKNHLGRE IREALLMGDR PGRRTREMMM ERRWFEGVRM SWRAVSQAKL  420
LVKMKSQGSA MEHLRGGARF SVWEEDDGRA LSLGWQGRRL LTVTAWRCSP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G41920.12e-40GRAS family protein