PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA57357.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

NAC

Protein Properties

Length: 211aa MW: 25198.3 Da PI: 9.701

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA57357.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	172	1.8e-53	7	135	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk...kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 +ppGfrFhPt+eelv +yL++k++++k++l +vi e+d+yk+ePw+L+ ++e+kewyfFs++dkky++g+r+nrat +g+Wkatg+dk+v+s k PKA57357.1 7 VPPGFRFHPTEEELVGYYLRRKIASQKIDL-QVIMEIDLYKIEPWELQDrcnLGYEEQKEWYFFSHKDKKYPSGTRTNRATIAGFWKATGRDKAVVS-K 103 69**************************.99**********943433334778**********************************.9 PP NAM 97 gelvglkktLvfykgrapkgektdWvmheyrl 128 +e++g++ktLvfy+grap+g+ktdW++he+rl PKA57357.1 104 SEVIGMRKTLVFYQGRAPNGRKTDWIIHEFRL 135 99**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 211 aa Download sequence
MEVELSVPPG FRFHPTEEEL VGYYLRRKIA SQKIDLQVIM EIDLYKIEPW ELQDRCNLGY 60 EEQKEWYFFS HKDKKYPSGT RTNRATIAGF WKATGRDKAV VSKSEVIGMR KTLVFYQGRA 120 PNGRKTDWII HEFRLQSSLD IEHPSPQANI LLFIWPRIAV IRFSYISRTS IMFLRLQKIT 180 SRCFKFIISH FSMPFHLETY QMMLHDYLLY V

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G18060.1	1e-82	NAC family protein