PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA57519.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family bHLH
Protein Properties Length: 224aa    MW: 25380 Da    PI: 4.7946
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA57519.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH452e-1458104455
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 ++  +Er+RR+++N+++ +Lr+++P+      +K++Ka+i + A+eYI++Lq
  PKA57519.1  58 KNIVMERNRRKKLNERLYTLRSIVPNI-----TKMDKASIIKDAIEYIQELQ 104
                 56689*********************7.....7******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 224 aa     Download sequence    
MDEMDAEYDH YWDFKLFFDG EELNNWGTGL DEAFPIDYDS SSPEGGSSSS SSSAATTKNI  60
VMERNRRKKL NERLYTLRSI VPNITKMDKA SIIKDAIEYI QELQAEEKKL IAEIGELESG  120
KEIDKFSSMI DITKKRRMAS LGSSVAHSIE VIEMNVCIVG EGILVVSITC NKKRNTMMMV  180
SQLFESLKLK ILTASFTSIS GSLLHTFFIE VYIDFPSLNR IVNW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57150.24e-57bHLH family protein