PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA57568.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

WRKY

Protein Properties

Length: 250aa MW: 26174.7 Da PI: 10.4947

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA57568.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	33.1	1.1e-10	230	250	2	22
--SS-EEEEEEE--TT-SS-E CS WRKY 2 dDgynWrKYGqKevkgsefpr 22 +D+y+WrKYGqK++kgs++pr PKA57568.1 230 SDEYCWRKYGQKPIKGSPYPR 250 69******************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 250 aa Download sequence
MSVDLIGHAK MDDKISIQEA AVSGIRSTES LMFHLNRQQH QNSSSPASPA DAPATDYRAI 60 TDHTVSSFKK MISILTLTGH ARFRRGPVAA EQTASPPPPL VATISKPSSA VGKTAEIAVA 120 VATTTDSGNS SLSSVTGDGR VSNGRESGSS PVILPLVASV SAGGTAIVGK PPLSSSVYKK 180 RGYGQTHSKN VSGKLAGAGA HCHCPESRKN RAKMTIRVPA VSTKLADIPS DEYCWRKYGQ 240 KPIKGSPYPR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G31550.1	7e-59	WRKY family protein