PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA57586.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

C2H2

Protein Properties

Length: 122aa MW: 13502 Da PI: 4.9811

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA57586.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14	0.00015	32	54	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C ++F ++ L H++ H PKA57586.1 32 FPCNFCQRTFYSSQALGGHQNAH 54 89******************988 PP

Sequence ? help Back to Top
Protein Sequence Length: 122 aa Download sequence
METNDLNLDL ALHQSSPAAA AEWPEEEPAR VFPCNFCQRT FYSSQALGGH QNAHKLERSL 60 AKRSREFAAA VREPQAGGGV ERGPTLGLFG GCERITEGKE MPFINGAYRR PEDEEVDLSL 120 RL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G57520.1	6e-19	C2H2 family protein