PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA57921.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

C2H2

Protein Properties

Length: 361aa MW: 40273 Da PI: 9.1691

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA57921.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.9	7.9e-05	116	138	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C Cg+ F +s L +H + H PKA57921.1 116 YVCRVCGRKFFAHSKLLNHFKIH 138 9******************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 361 aa Download sequence
MPPIIRRLPH QISPSLPLGV LRRTLASSIS AASGDSSPPV AVFWDLDNIP SNSIRPLDAA 60 VRLRLAASSI GPLRFVVAYA SPHVFRHVPY PVRAAREAGN DRLEDSGAVP ASSEPYVCRV 120 CGRKFFAHSK LLNHFKIHEQ EHAKRLRRLD SLVGSRYVRL KAQLTMKMEK YRKAARDILI 180 PRVGYSLGDE LCRAGVVVRT VEDRPEAADG ALRRHMVETM DRGKIGCLVL VSDDTGFVGV 240 IREARLRCLK TVVIGDEGDG GLKRCADASF SWKDVISGKA RKEAASAMVK WKDKDLLTKL 300 EWRYREEKML KGSKLEGSEC DDLGYQTDDV DGFQESDNGD NGAYEPWWKL DEESDTSVAR 360 R

Sequence ? help Back to Top

Protein Sequence Length: 361 aa Download sequence

MPPIIRRLPH QISPSLPLGV LRRTLASSIS AASGDSSPPV AVFWDLDNIP SNSIRPLDAA  60
VRLRLAASSI GPLRFVVAYA SPHVFRHVPY PVRAAREAGN DRLEDSGAVP ASSEPYVCRV  120
CGRKFFAHSK LLNHFKIHEQ EHAKRLRRLD SLVGSRYVRL KAQLTMKMEK YRKAARDILI  180
PRVGYSLGDE LCRAGVVVRT VEDRPEAADG ALRRHMVETM DRGKIGCLVL VSDDTGFVGV  240
IREARLRCLK TVVIGDEGDG GLKRCADASF SWKDVISGKA RKEAASAMVK WKDKDLLTKL  300
EWRYREEKML KGSKLEGSEC DDLGYQTDDV DGFQESDNGD NGAYEPWWKL DEESDTSVAR  360
R

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G12240.1	1e-100	C2H2 family protein