PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA58112.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

SBP

Protein Properties

Length: 171aa MW: 19139 Da PI: 8.6674

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA58112.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	78.8	7.9e-25	60	108	1	49
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSE CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrf 49 +Cq+e+C+adl+eak+yhrrhkvCe+h+ka +v+v+g++qrfCqqCsrf PKA58112.1 60 ICQAEKCAADLTEAKRYHRRHKVCEAHAKAVAVIVAGIRQRFCQQCSRF 108 5***********************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 171 aa Download sequence
MRRTAKEPRP SPKGKAFAAT EEGGCGEEES EEERRLRQSA SPPAAPGARG RAAAIAGVPI 60 CQAEKCAADL TEAKRYHRRH KVCEAHAKAV AVIVAGIRQR FCQQCSRFLC PPLFRLFTVF 120 TTERRQNLST GRTLRVSSDE GTESLLDVER NPILFMIEQF LFCYSFLEFL C

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G02065.2	2e-23	SBP family protein