PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA58117.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family Dof
Protein Properties Length: 209aa    MW: 22087.2 Da    PI: 10.6476
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA58117.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof106.51.4e-332578457
      zf-Dof  4 kalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrk 57
                  +kcprC+s++tkfCyynnys +qPr+fC+aCrryWt+GGalrn+P G++   
  PKA58117.1 25 PPRKCPRCQSADTKFCYYNNYSSAQPRHFCRACRRYWTEGGALRNLPAGSSHTA 78
                5689*********************************************98755 PP
Sequence ? help Back to Top
Protein Sequence    Length: 209 aa     Download sequence    
MEHRRQQDRG TRSGKSAAAK PLAEPPRKCP RCQSADTKFC YYNNYSSAQP RHFCRACRRY  60
WTEGGALRNL PAGSSHTAAA RRAARLSKKL LASSSSSSSV AAASAAHGLK LPPLPRIAGQ  120
GFLREYPIGH QTAAIPAMSP VLNPDLVLCS PAATPLLVGV PTAPFLGPPP VGEVELRFLD  180
DFLGGNQEVS GGSSSAGALR PPPSSRSFI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07640.17e-24Dof family protein