PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA58385.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family C2H2
Protein Properties Length: 124aa    MW: 13337 Da    PI: 9.3669
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA58385.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H219.62.5e-064062123
                EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                ++C++Cg+ F+++  L  H++ H
  PKA58385.1 40 FECHYCGRDFPNSQALGGHQNAH 62
                89******************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 124 aa     Download sequence    
MAAKGSNGGI FRLFGFSVTN DVVEEARPQP PPPDLLGRRF ECHYCGRDFP NSQALGGHQN  60
AHKRERQRAR LSQLQAAAAA HSAVAPLVPR LLWYSAAGGD LRGFSPGQRP PAVSDADVDL  120
HLGL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58070.14e-13C2H2 family protein