PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA58462.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family ERF
Protein Properties Length: 290aa    MW: 31910 Da    PI: 4.6449
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA58462.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP252.11.7e-1656104355
         AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 + GVr+++ +gr++AeIrdp +   + r++lg+f+ta+eAa a+++a+ +++g
  PKA58462.1  56 FLGVRRRP-WGRYAAEIRDPAT---KERHWLGTFDTAYEAAVAYDRAAIAMKG 104
                 56******.**********843...4***********************9998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 290 aa     Download sequence    
MRNHPPISPQ ESSWVEYPLT QNAFISSHLQ ASSSSPHQLS AERRGSRRRH SEPGRFLGVR  60
RRPWGRYAAE IRDPATKERH WLGTFDTAYE AAVAYDRAAI AMKGAQARTN FIYADSSSSS  120
VLSLGSAPAE NQNYPLIFPD PPPPSNSPPL AGEADQQLPL QATAGDAVGG ELEFSCGARD  180
WDLSSIVAES CVRSASWRNC ELNSQVLSPP AAAAMESSSI RGSCGELPIA GEGGGDLSCS  240
MEKPLWVESP LLGPNDHDND QLPENWIHSE NNYYAFDYDY DHQYDYFQLF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18560.12e-29ERF family protein