PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA58526.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

WOX

Protein Properties

Length: 148aa MW: 15830.8 Da PI: 9.7422

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA58526.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	25.6	2.2e-08	8	40	29	57
HHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 29 ereeLAkkl....gLterqVkvWFqNrRakekk 57 e ++ k l ++ +++V++WFqNrR + ++ PKA58526.1 8 ETVRIRKLLekfgSVGDANVFYWFQNRRSRSRR 40 55555555555578999*************997 PP
2	Wus_type_Homeobox	63.4	4.6e-21	1	42	24	65
Wus_type_Homeobox 24 lrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 +++P+k+e+ ri++ Le++G ++d+NVfyWFQNr++R+r++q PKA58526.1 1 MVNPPKDETVRIRKLLEKFGSVGDANVFYWFQNRRSRSRRRQ 42 78**************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 148 aa Download sequence
MVNPPKDETV RIRKLLEKFG SVGDANVFYW FQNRRSRSRR RQRQIQAAIA AASSDSGTHP 60 GGGGGCASAT PSLVITSPSS SASTSSPVTV LINGVPLEVP RGPFDMRAMF GCDSVLFHSS 120 GGALPVDEHG VLSQSLQMGE SYYLVRFN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G17810.1	4e-17	WOX family protein