PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA58533.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

MYB

Protein Properties

Length: 233aa MW: 26224.4 Da PI: 9.3502

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA58533.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52.7	1e-16	61	106	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ed +l ++v+q+G+ +W++Ia+++ gR++k+c++rw++ PKA58533.1 61 RGHWRPAEDAKLRELVAQFGPQNWNLIAEKLE-GRSGKSCRLRWFNQ 106 899***************************.*********996 PP
2	Myb_DNA-binding	55.8	1.1e-17	113	156	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 ++++T+eE+e+l+ a++ +G++ W++Iar ++ gRt++ +k++w+ PKA58533.1 113 KKSFTEEEEERLLSAHRFYGNK-WALIARIFP-GRTDNAVKNHWHV 156 678*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 233 aa Download sequence
MGFSPVSPPP NVFPAVADGD GRSEEISLPL HQLLSVGEGS NGSEDQEGTE NESGQSKLCA 60 RGHWRPAEDA KLRELVAQFG PQNWNLIAEK LEGRSGKSCR LRWFNQLDPR INKKSFTEEE 120 EERLLSAHRF YGNKWALIAR IFPGRTDNAV KNHWHVIMAR RHREQFNACR RRKHSNPISV 180 NCGNNSSSAD SAISNNSSVN RNIHGHGFFS GSFLFMLLLL YFLSKSFFLG LLS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69560.1	1e-68	MYB family protein