PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA58604.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family ERF
Protein Properties Length: 242aa    MW: 27436 Da    PI: 10.0046
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA58604.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.51.9e-1999148255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                 +++GVr+++ +g+W+AeIrdps    r kr++lg+f taeeAa+ +++a+ +l+g
  PKA58604.1  99 RFRGVRRRP-WGKWAAEIRDPS----RrKRVWLGTFETAEEAAAVYDHAAVRLKG 148
                 69*******.**********84....34************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 242 aa     Download sequence    
MQISNRSNRL DLSSLPMKFA AQMMPDGKRR RLRPRLLRIF FTDADATDSS SCDEEPAGLD  60
RRRARRQVLE IGFGVGARQI RDRRPETKRR AAAADDGRRF RGVRRRPWGK WAAEIRDPSR  120
RKRVWLGTFE TAEEAAAVYD HAAVRLKGAR AVTNFPTPAL PAKVEKSVDE GSGTLPSPTS  180
VLRYDVEQTA FDCLGFSNVD AFGLSVEPPL SLTEFYRPKQ YCWEVEFGDF NADDFSLEVV  240
SF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12832KRRRL
22936RRRLRPRL
3104123RRRPWGKWAAEIRDPSRRKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61630.17e-17ERF family protein