PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA58623.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family bHLH
Protein Properties Length: 204aa    MW: 23205.8 Da    PI: 8.7602
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA58623.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH474.6e-154496155
                CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH  1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                r+++hn+ Er RR+++Ns f+ Lr+llP++  ++ kKls  +++ +  +YI +Lq
  PKA58623.1 44 RKKNHNAYERDRRKKLNSLFSSLRSLLPES--GHRKKLSIPSTVNQMLKYIPELQ 96
                799**************************8..57777***************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 204 aa     Download sequence    
MQDLLCLDEV SFSLPPSPAP PAELDDLSWP SVLSPISGHC RSPRKKNHNA YERDRRKKLN  60
SLFSSLRSLL PESGHRKKLS IPSTVNQMLK YIPELQQHIE QLKKKKEELQ IEISQGSLQE  120
HLAHRNNDCA LPIVSAICLS KKEIMIQLCF TKDNNKAGSR GSFSRVLMAL EEEGLQLMNA  180
SSFVANDRRI FHFLHLEVIN NIIN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14458RKKNHNAYERDRRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56970.13e-16bHLH family protein