PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA58661.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

MYB_related

Protein Properties

Length: 570aa MW: 64920.4 Da PI: 6.9644

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA58661.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	39.6	1.2e-12	106	148	2	45
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 + W ++E+ ll+++++++G g+W+ +a+++g ++ +qc++++ PKA58661.1 106 QDWNADEEILLLEGIEMYGLGNWAEVAEHVG-TKNKEQCINHYM 148 57***************************.********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 570 aa Download sequence
MGRSRAVSNS ADDDANQRSK RRRVASTGEN LENTTTSQSG TEGKKALYHC NYCNKDISGK 60 IRIKCTKCPD FDLCVECFSV GAEVTPHKSN HPYRVMDNLS FPLICQDWNA DEEILLLEGI 120 EMYGLGNWAE VAEHVGTKNK EQCINHYMAL YMNSPSYPLP DMSRVNGKNR KELLAMAKAQ 180 GISNLGNVTP KEDSPFSPSR VKIEDLSAEA LGGRSPSGTF KKVSNLGQLK GGSDETKREN 240 LSLPEDVNGD RTIGIKKPKY SKDEVPSMTE LSGYNPKRRE FDPEYDNDAE KLLAEMEFKD 300 TDTETDRELK LRNSCLWRDF ADRLDERKRR KDFILERNLL YPHPMEKDLS DEDREVYQRF 360 KVFMRFLPQE EFETLVKSVL EERKMRRRIQ ELQECRAAGC RTLADAKMYI EQKRKELEAN 420 AKKTNETSPV VNNGKVLQKA NRTLSREKIE TDGTVESLKV RVGASIDSAG KDLSLATGQA 480 SLKLFEEWDI RGLPGTEFLS ESEYQLCCDN RLLPNHFLKM QEALVQQILK GAVTKKDDAH 540 HLFKVDPNKI DKVYEIVRKK LGQNEDSANV

Sequence ? help Back to Top

Protein Sequence Length: 570 aa Download sequence

MGRSRAVSNS ADDDANQRSK RRRVASTGEN LENTTTSQSG TEGKKALYHC NYCNKDISGK  60
IRIKCTKCPD FDLCVECFSV GAEVTPHKSN HPYRVMDNLS FPLICQDWNA DEEILLLEGI  120
EMYGLGNWAE VAEHVGTKNK EQCINHYMAL YMNSPSYPLP DMSRVNGKNR KELLAMAKAQ  180
GISNLGNVTP KEDSPFSPSR VKIEDLSAEA LGGRSPSGTF KKVSNLGQLK GGSDETKREN  240
LSLPEDVNGD RTIGIKKPKY SKDEVPSMTE LSGYNPKRRE FDPEYDNDAE KLLAEMEFKD  300
TDTETDRELK LRNSCLWRDF ADRLDERKRR KDFILERNLL YPHPMEKDLS DEDREVYQRF  360
KVFMRFLPQE EFETLVKSVL EERKMRRRIQ ELQECRAAGC RTLADAKMYI EQKRKELEAN  420
AKKTNETSPV VNNGKVLQKA NRTLSREKIE TDGTVESLKV RVGASIDSAG KDLSLATGQA  480
SLKLFEEWDI RGLPGTEFLS ESEYQLCCDN RLLPNHFLKM QEALVQQILK GAVTKKDDAH  540
HLFKVDPNKI DKVYEIVRKK LGQNEDSANV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	20	24	KRRRV
2	327	332	RKRRKD