PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA58704.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family G2-like
Protein Properties Length: 242aa    MW: 27536.8 Da    PI: 7.637
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA58704.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like111.63.7e-35140194155
     G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                 kpr+rWtpeLHerFveav++LGGse+AtPk +l+lm+v+gLt++hvkSHLQkYR+
  PKA58704.1 140 KPRMRWTPELHERFVEAVNHLGGSERATPKGVLKLMQVDGLTIYHVKSHLQKYRT 194
                 79****************************************************8 PP
2Myb_DNA-binding58.51.5e-18142193148
                      TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 
                      r+rWT+e++e++v+av+ lGg    t+k + + m+  g+t +++ks++qky+
       PKA58704.1 142 RMRWTPELHERFVEAVNHLGGSeraTPKGVLKLMQvDGLTIYHVKSHLQKYR 193
                      89******************99*****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 242 aa     Download sequence    
MGVAYSPARF RISSSNTRAY RPSTDNYHQE LNENPWCPDA LRDILDYPNC VTIESGQIQS  60
NCAIHVGSMK QNEWSDLTEL MDNYCRDLMD EIGSSNSELK VVKQSSDASI HHTNTYQSIS  120
SVELGSISGT TFSTNATVAK PRMRWTPELH ERFVEAVNHL GGSERATPKG VLKLMQVDGL  180
TIYHVKSHLQ KYRTTRYRTE SSEDRQTKRA KALRQLRSSL VNLDFGSWLM SPPHLIEEEK  240
PR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28610.17e-41G2-like family protein