PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA58788.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family LBD
Protein Properties Length: 182aa    MW: 19605.2 Da    PI: 7.8008
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA58788.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260126.51.3e-3971071100
      DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallk 98 
                 +C aCk+lrrkC+++Cv+apyf ++q +++fa++hk+FGasnv+kll++lp ++r +a+ s+ yeA+ar++dP+yG+v++i++lqqq+ +l+a+la+lk
  PKA58788.1   7 PCGACKFLRRKCVRGCVFAPYFSHDQgAAHFAAIHKVFGASNVSKLLAHLPVSDRCEAAVSISYEAQARLHDPIYGCVSHIFALQQQVVSLQAQLASLK 105
                 7*************************89********************************************************************999 PP

      DUF260  99 ee 100
                 ++
  PKA58788.1 106 AQ 107
                 87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 182 aa     Download sequence    
MTGVGSPCGA CKFLRRKCVR GCVFAPYFSH DQGAAHFAAI HKVFGASNVS KLLAHLPVSD  60
RCEAAVSISY EAQARLHDPI YGCVSHIFAL QQQVVSLQAQ LASLKAQANS QGNGNQGLVM  120
SDQPSSAGNN PSLSWELMNQ NLGIKEMFTF VSAEDGSSCS RKQAYSDMED LQSVAFAYLH  180
RS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58190.12e-52LBD family protein