PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA58952.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family NF-YB
Protein Properties Length: 120aa    MW: 13379.3 Da    PI: 4.655
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA58952.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB1542.7e-4823115193
       NF-YB   1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrel 93 
                 +re+drflPi  ++rim+k++P+n+ki+++ake vqecv+efisf+tsea dkcq+e+rkti+gddl+wal++lGfe+yveplk+yl+ yre+
  PKA58952.1  23 MREHDRFLPIVGIGRIMRKAIPENGKIAREAKEFVQECVTEFISFITSEAVDKCQKEERKTITGDDLVWALSSLGFEEYVEPLKLYLQLYREV 115
                 589****************************************************************************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 120 aa     Download sequence    
MAGPSPESST SGDHGNDAVV GGMREHDRFL PIVGIGRIMR KAIPENGKIA REAKEFVQEC  60
VTEFISFITS EAVDKCQKEE RKTITGDDLV WALSSLGFEE YVEPLKLYLQ LYREVIVSLC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38880.62e-51NF-YB family protein