PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA58961.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family WRKY
Protein Properties Length: 237aa    MW: 25962.6 Da    PI: 6.0802
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA58961.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY72.46.2e-232177259
                --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY  2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
                dDg++WrKYGqK++ gs+fpr  +r t+ gC ++k+v+rs+edp++++i Y+g H+++
  PKA58961.1 21 DDGHSWRKYGQKDILGSKFPRCTHRHTH-GCLATKQVQRSDEDPSIFDISYRGAHTCS 77
                8*******************98888775.9**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    
MPRWNGQVRV SSGASVEAPT DDGHSWRKYG QKDILGSKFP RCTHRHTHGC LATKQVQRSD  60
EDPSIFDISY RGAHTCSQDH RLPTAGPPPE DRTLQRISPP IPTSDRQQPQ PLSSQILRTS  120
LKVEIEGLSS DDHQLGSSPS FSFPSTPESC TNKPENHLLW NYSQAFLTAA SPETRFFSPP  180
SPLVVNNSGA GEARLQSSEV SGILSAAAPA TSSQPFAVVF QPEQLEFDAE FPFDFSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23810.11e-34WRKY family protein