PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA58974.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

Dof

Protein Properties

Length: 242aa MW: 25420.1 Da PI: 5.8157

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA58974.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	126.7	7.2e-40	21	81	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +e++l+cprC+stntkfCyynny+lsqPr+fCk CrryWtkGGalrnvPvGgg+rk+ k+s PKA58974.1 21 PEQSLQCPRCESTNTKFCYYNNYNLSQPRHFCKDCRRYWTKGGALRNVPVGGGTRKSSKRS 81 7899****************************************************99876 PP

Sequence ? help Back to Top
Protein Sequence Length: 242 aa Download sequence
MQGAAGPAAA FGAAKSPFPE PEQSLQCPRC ESTNTKFCYY NNYNLSQPRH FCKDCRRYWT 60 KGGALRNVPV GGGTRKSSKR SSSAASGDET VGAGNPKRPS PASSGSNCSP NVVSGEVLKP 120 EPLSVSFPPV DEDHRLLDMT GSFSSLLSSA ENFGNLMEFY PPTDAVLSSL PILRDVTRPI 180 LEPELQSSAE SRGNNGVSSS AATASALPAP AAENYLGLTG DSGCWSGGWP DLSIYTPGSS 240 FQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G51700.1	1e-36	Dof family protein