PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA59014.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

WRKY

Protein Properties

Length: 188aa MW: 21291.4 Da PI: 8.6986

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA59014.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	96.4	2e-30	80	138	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDg++WrKYG+K vk+s++pr+YYrC+s gC vkk+ver+++dp++v++ Yeg+Hnh+ PKA59014.1 80 LDDGFKWRKYGKKAVKDSPNPRNYYRCSSIGCGVKKRVERDHNDPRYVITSYEGTHNHQ 138 59********************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 188 aa Download sequence
MAPDLRQWQF SEAGDGHYTS SPAGTTPEFG YVSERWARLN FPTENSKDVG QKVSWEEVKR 60 RKVDSRGRIG FRIESETEIL DDGFKWRKYG KKAVKDSPNP RNYYRCSSIG CGVKKRVERD 120 HNDPRYVITS YEGTHNHQSP DACCLHSQAY HHPNSSSPSS PTSCGQILLP FAAPSHSWSS 180 QFASPSYT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	59	95	KRRKVDSRGRIGFRIESETEILDDGFKWRKYGKKAVK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G26170.1	2e-36	WRKY family protein