PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA59076.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

NAC

Protein Properties

Length: 281aa MW: 31262.2 Da PI: 9.4308

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA59076.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	180.8	3.5e-56	15	143	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kge 98 lppGfrFhPtdeel+++yL kkv +++++ ++i+e+d++k+ePw+Lp k+k +ekewyfFs rd+ky+tg r+nrat++gyWkatgkd+e++s+ +g+ PKA59076.1 15 LPPGFRFHPTDEELITHYLLKKVLDSNFTG-RAIAEIDLNKCEPWELPVKAKMGEKEWYFFSLRDRKYPTGLRTNRATDAGYWKATGKDREIYSSrTGS 112 79***********************999.89***********99999************************************987888 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrle 129 lvg+kktLvfy+grapkgek++Wvmheyrle PKA59076.1 113 LVGMKKTLVFYRGRAPKGEKSNWVMHEYRLE 143 9**************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 281 aa Download sequence
MDSFGNNFVN QEAQLPPGFR FHPTDEELIT HYLLKKVLDS NFTGRAIAEI DLNKCEPWEL 60 PVKAKMGEKE WYFFSLRDRK YPTGLRTNRA TDAGYWKATG KDREIYSSRT GSLVGMKKTL 120 VFYRGRAPKG EKSNWVMHEY RLEGKFSYHF LSRASKDEWV ISRVFQKNGG LKKLRNGFSC 180 SSAAASYSAD RQSSSFTGVG RDHVPCFSTL ENAGFAGGHL STSLHIPSIV GGLTTTASPA 240 APATYESSVV HGRSDAVAGG GWPFDLDRKV GSTELDCMWS I

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G53950.1	1e-101	NAC family protein