PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA59095.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

NAC

Protein Properties

Length: 318aa MW: 34752.6 Da PI: 7.4466

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA59095.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	163.6	7e-51	13	140	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel. 99 ppGfrFhPtd+el+ +yLkkkv+++ +++++i+++d+yk++Pw+Lp+k+ +e ew+fFs+rd+ky++g r+nra++sgyWkatg+dk++l+++g + PKA59095.1 13 PPGFRFHPTDQELIIHYLKKKVAASLPPESTIITDIDLYKFNPWELPEKALFGEGEWFFFSPRDRKYPNGVRPNRAAASGYWKATGTDKPILAAGGIQc 111 9**********************9999899***********87778999**********************************955544 PP NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128 g+kk Lvfykgr pkg+kt+W+mheyrl PKA59095.1 112 LGVKKALVFYKGRPPKGTKTEWIMHEYRL 140 9************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 318 aa Download sequence
MEGGAALPGP PFPPGFRFHP TDQELIIHYL KKKVAASLPP ESTIITDIDL YKFNPWELPE 60 KALFGEGEWF FFSPRDRKYP NGVRPNRAAA SGYWKATGTD KPILAAGGIQ CLGVKKALVF 120 YKGRPPKGTK TEWIMHEYRL LDAASAASNK PKGAIKIFSD LEVFVVQLDD WVLCRVRKKG 180 GQQPENEEKP SPEAIFSRSP ENARQQLGAK GRGSFMDLSD CQLMGYLLGS SSSEAESAGE 240 SSDLISGGGY IGYQQPASGG RDVLSSMLSS MKRKISFSSL DDLMTLPPVG KRLHFPAGGQ 300 LSPTESGSED QECLEFLI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15510.1	1e-72	NAC family protein