PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA59096.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family NAC
Protein Properties Length: 301aa    MW: 34348.8 Da    PI: 6.6643
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA59096.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM167.16.1e-52151422128
         NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgel 99 
                 ppGfrFhPtdeel+++yL+kkv+++  +++++i++vd+yk++Pw+Lp+k   +e+ew+fFs+rd+ky++g r+nrat+sgyWkatg+dk++l+  ++  
  PKA59096.1  15 PPGFRFHPTDEELISYYLRKKVTASLPPESSIIADVDLYKFDPWELPAKGFFGETEWFFFSPRDRKYPNGIRPNRATRSGYWKATGTDKPILTVsGSCC 113
                 9************************9999999***************7666789*************************************99846667 PP

         NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128
                 +g+kk Lvfykgr pkg kt+Wvmheyrl
  PKA59096.1 114 IGVKKALVFYKGRPPKGIKTEWVMHEYRL 142
                 ***************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 301 aa     Download sequence    
MFMEAGELSA RFQFPPGFRF HPTDEELISY YLRKKVTASL PPESSIIADV DLYKFDPWEL  60
PAKGFFGETE WFFFSPRDRK YPNGIRPNRA TRSGYWKATG TDKPILTVSG SCCIGVKKAL  120
VFYKGRPPKG IKTEWVMHEY RLLDSVVSSP GRKQRNSMRL DDWVLCRVRH KGSEEKDEVH  180
RDRIRGSRQS EFKINVRETK EKQQVQTEMG GFLDWSDGQL LGYLLDSLES DEIGCSGEHD  240
GLCSTDGLPS DCFFSDSQLQ STELVSAAFS PFKRMKCSAD GQWWPAPELC SVDQFSPDSS  300
K
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61110.16e-79NAC family protein