PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA59127.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

CO-like

Protein Properties

Length: 163aa MW: 18429 Da PI: 9.0089

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA59127.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	17.9	6.7e-06	3	34	4	35
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHk 35 + C+ ++ + + +C + lC C l+ H+ PKA59127.1 3 PLCDFCGAETALVYCGADAARLCLLCDLYVHS 34 78***************************995 PP
2	CCT	67.2	4.4e-23	106	148	1	43
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkq 43 R++a++RY eK+k+R+F K+irY sRK++A++R+RvKGrFvk PKA59127.1 106 RREAMMRYLEKKKSRLFGKQIRYVSRKERADTRKRVKGRFVKI 148 99***************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 163 aa Download sequence
MDPLCDFCGA ETALVYCGAD AARLCLLCDL YVHSANALSL RHFRAVLCCR CHSQPASFCY 60 ANDRLSLCIN SETSPTDYQD SGISPMAISG NLPTNTDSRG NNRQRRREAM MRYLEKKKSR 120 LFGKQIRYVS RKERADTRKR VKGRFVKIGE TYDHDTLVTI SSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21880.1	8e-27	CO-like family protein