PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA59397.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

C2H2

Protein Properties

Length: 118aa MW: 12400.7 Da PI: 9.9494

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA59397.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15.5	4.9e-05	91	113	2	23
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 +C+ C+++F++ L+ H + H PKA59397.1 91 TCKSCSRTFNSDNALQAHTKAkH 113 7*****************99877 PP

Sequence ? help Back to Top
Protein Sequence Length: 118 aa Download sequence
MVETSGDSDE EDENDSSEEE TPPKNSETAK KRKVDSTSKA SVPDKKAKVI TPVGIVRTGG 60 DGKKAVHTAT PHPAKQVGKQ RQTPKSGGSV TCKSCSRTFN SDNALQAHTK AKHGAAAK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03740.1	1e-13	C2H2 family protein