PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA59446.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family MYB
Protein Properties Length: 334aa    MW: 37639.9 Da    PI: 6.9552
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA59446.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding56.47.1e-181461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+eEd +lv +++++G+g+W++I+   g+ R+ k+c++rw +yl
       PKA59446.1 14 KGPWTPEEDIILVSYINEHGPGNWRSIPLNSGLSRCSKSCRLRWTNYL 61
                     79********************************************97 PP
2Myb_DNA-binding49.59.5e-1667112148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg++T  E++l+v++ ++lG++ W++Ia++++  Rt++++k++w+++l
       PKA59446.1  67 RGSFTDKEEKLIVHLQALLGNR-WAAIASYLP-DRTDNDIKNYWNTHL 112
                      899*******************.*********.************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    
MGRPPCCEKT GLKKGPWTPE EDIILVSYIN EHGPGNWRSI PLNSGLSRCS KSCRLRWTNY  60
LRPGIKRGSF TDKEEKLIVH LQALLGNRWA AIASYLPDRT DNDIKNYWNT HLKKKMIKEL  120
AMGDECSNRC EPLIGRGQWE RTLQTDIKMA KRALHEALTM ENPTFLRMNQ LVYPTASTTT  180
TLLTASTSDD DDDHHHHHHH HQPPSTYASS TSNIARLLKN WPSKSNYSPN YYNTTAGATV  240
PSRANSSHSK NSSAAVAGAD STSSDGTTAS SKVESHEDQL PFKKETSKLQ GFEADQLPFS  300
ILESWLFDDE NYDQEYESNL IHDMTMHDAS VLFG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G47600.19e-90MYB family protein