PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA59578.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family ERF
Protein Properties Length: 245aa    MW: 26677.1 Da    PI: 4.9375
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA59578.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.56.7e-1887135355
         AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 y+GVr +  +g+Wv+eIr+p++   ++r++lg+f tae+Aa+a++ a++ ++g
  PKA59578.1  87 YRGVRMRN-WGKWVSEIREPRK---KTRIWLGTFPTAEMAARAHDVAALTIKG 135
                 9****998.**********843...6**********************99887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 245 aa     Download sequence    
MVPTLITLKF LSPLLLPPPF SPPLKNPFFF SPQPPTFFPS MEDPISSHQC EPSTSSSSSS  60
PFSISDDKPE KQAAAAGGSG QGKKRAYRGV RMRNWGKWVS EIREPRKKTR IWLGTFPTAE  120
MAARAHDVAA LTIKGQSAHL NFPELAGDLP RPATAAPKDI QAAAAMAAAA NFIDKSSSSS  180
SSGDCRSSDN SITPSVVPDN DDELFDLPDL PLDSFYESLS WILPVAAEEY FAGIRLEEPF  240
LWETF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44940.13e-37ERF family protein