PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA59731.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

LFY

Protein Properties

Length: 229aa MW: 24777.8 Da PI: 11.313

Description

LFY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA59731.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FLO_LFY	96.4	4.9e-30	6	177	196	371
FLO_LFY 196 kkkkelkseededeeeeededeegsgedgeerqrehPfivtepgevargkkn..GLDYLfdLyeqCrefLlqvq.kiakerGekcPtkvtnqvfryakk 291 ++ + +e +ed+++ e +++++ g +g erqrehPfivtep g G C+efLlq + + + +P + + r+a+ PKA59731.1 6 RRGGD-LAEMNEDDDDAEGSESSERGVSG-ERQREHPFIVTEPRRGGTGEEErpGPTSSIS-TSTCHEFLLQLAgSPPRAWRQSAPPRCSDTRRRWARA 101 33333.33445555555665666666655.9**********776666655115554444.478***9724567888999********98 PP FLO_LFY 292 agasyinkPkmrhYvhCYalhcLdeea...snalrrafkergenvGawrqacykplvaiaarqgwdidavfnahprLsiWYvP 371 + nkPkmrhYvhCYal c + s l r+ +r Ga + + + lvai+a +++d+davfnahp LsiW P PKA59731.1 102 TS----NKPKMRHYVHCYALTCWTRGLltpSGGLSRS-AARTSAPGA--RPALQALVAISAAHAFDVDAVFNAHPCLSIWVRP 177 75....*************98642227778776.567777777..56789************************887 PP

Sequence ? help Back to Top
Protein Sequence Length: 229 aa Download sequence
MTARRRRGGD LAEMNEDDDD AEGSESSERG VSGERQREHP FIVTEPRRGG TGEEERPGPT 60 SSISTSTCHE FLLQLAGSPP RAWRQSAPPR CSDTRRRWAR ATSNKPKMRH YVHCYALTCW 120 TRGLLTPSGG LSRSAARTSA PGARPALQAL VAISAAHAFD VDAVFNAHPC LSIWVRPHQG 180 SATSAPRPQR TASSLPAALP PPGGGSATLL KPRRPPRRRP WPPAPLCSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G61850.1	7e-18	LFY family protein