PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA59885.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family C2H2
Protein Properties Length: 177aa    MW: 19069.8 Da    PI: 8.954
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA59885.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.40.000115577123
                EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                y+C+ Cgk F++   L  H ++H
  PKA59885.1 55 YQCSVCGKGFPSYQALGGHKSSH 77
                9*************999999888 PP
Sequence ? help Back to Top
Protein Sequence    Length: 177 aa     Download sequence    
MATKTLISFS LLSSPSPTSS PSPAKAELLL SIPVAAFADS GMPETRLAAP QFGHYQCSVC  60
GKGFPSYQAL GGHKSSHRRP AGPESPVVLA EISGSGPYQC FVCMRRFPTG QALGGHKRLH  120
YWEVTSTAPT SLSVNDRGFD LNMPPASPLT LADVDEEEMQ SSMPAKKIRR RHTELRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04340.17e-26C2H2 family protein