PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA59933.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

WRKY

Protein Properties

Length: 588aa MW: 63753.2 Da PI: 6.742

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA59933.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	101.7	4.2e-32	237	294	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 +DgynWrKYGqK+vkgsefprsYY+Ct+++C++kk++ers+ d++++e++Y+g+H+h+k PKA59933.1 237 EDGYNWRKYGQKHVKGSEFPRSYYKCTHPNCQMKKQLERSQ-DGQITEVIYRGRHEHPK 294 8**************************************.*************85 PP
2	WRKY	105.6	2.7e-33	414	472	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+Ct gC+v+k+ver+a+dpk+v++tYeg+Hnh+ PKA59933.1 414 LDDGYRWRKYGQKVVKGNPNPRSYYKCTNLGCSVRKHVERAAHDPKAVITTYEGKHNHD 472 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 588 aa Download sequence
MTEVPSSGVG DPSANGLHPD ASLPSVGAKY KTMSPARLPI SRSPCLTIPS GFSPSALLES 60 PVLLTNMKVE PSPTTGSFAM PLIMNNVSSG PVCSPDVSSK SCIPDDGNSR NFEFRPHIRS 120 TSRSGLSSLA PTASLGSNMQ QQSLSETLQS QCETQGTSSF SLLVKTENIS PSSHGLALSK 180 TASDSSPDEF FSLKANAFTE DASNEFQQTT DADSPVPASH SDHNCFPSSN VMENTAEDGY 240 NWRKYGQKHV KGSEFPRSYY KCTHPNCQMK KQLERSQDGQ ITEVIYRGRH EHPKPQPSRR 300 LPVGAVFTGQ AEERTHAFPS TANTEEKLST AHGHASQHVS TNCNSELSPV SLSDDEIENE 360 GGRSGLLGNE VVDDDDPESK RRKMEATAVE ANSLAKNNRE PRVVVQTVSE VDILDDGYRW 420 RKYGQKVVKG NPNPRSYYKC TNLGCSVRKH VERAAHDPKA VITTYEGKHN HDVPVAKNGG 480 NHEPSANLSR SSSSHHYSQS EENTAVNLHL GVGTNSNYNS SITEKQHHQL QYVGSDCSNV 540 MIRANPMPKH GVVFSFGDGE GEVFSFGTQI NSSSSHYCPR AGNLVMGP

Sequence ? help Back to Top

Protein Sequence Length: 588 aa Download sequence

MTEVPSSGVG DPSANGLHPD ASLPSVGAKY KTMSPARLPI SRSPCLTIPS GFSPSALLES  60
PVLLTNMKVE PSPTTGSFAM PLIMNNVSSG PVCSPDVSSK SCIPDDGNSR NFEFRPHIRS  120
TSRSGLSSLA PTASLGSNMQ QQSLSETLQS QCETQGTSSF SLLVKTENIS PSSHGLALSK  180
TASDSSPDEF FSLKANAFTE DASNEFQQTT DADSPVPASH SDHNCFPSSN VMENTAEDGY  240
NWRKYGQKHV KGSEFPRSYY KCTHPNCQMK KQLERSQDGQ ITEVIYRGRH EHPKPQPSRR  300
LPVGAVFTGQ AEERTHAFPS TANTEEKLST AHGHASQHVS TNCNSELSPV SLSDDEIENE  360
GGRSGLLGNE VVDDDDPESK RRKMEATAVE ANSLAKNNRE PRVVVQTVSE VDILDDGYRW  420
RKYGQKVVKG NPNPRSYYKC TNLGCSVRKH VERAAHDPKA VITTYEGKHN HDVPVAKNGG  480
NHEPSANLSR SSSSHHYSQS EENTAVNLHL GVGTNSNYNS SITEKQHHQL QYVGSDCSNV  540
MIRANPMPKH GVVFSFGDGE GEVFSFGTQI NSSSSHYCPR AGNLVMGP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G26640.2	1e-122	WRKY family protein