PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA60063.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family LBD
Protein Properties Length: 129aa    MW: 14233.7 Da    PI: 8.4917
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA60063.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260118.92.9e-3718107188
      DUF260   1 aCaaCkvlrrkCakdCvlapyfpa.eq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqle 88 
                 +C aC++lrrkC+++C++apyf + +q +++fa+vhk+FGasnv+kll ++p+++r da+++++yeA+ r rdPvyG+v++i++lqqq++
  PKA60063.1  18 PCGACRFLRRKCVTGCIFAPYFDHaDQgTARFAVVHKVFGASNVSKLLLNIPPHKRLDAVATICYEAQTRFRDPVYGCVAHIFTLQQQVM 107
                 7*********************7635567***********************************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 129 aa     Download sequence    
MSSSAASAGD GGCSSAGPCG ACRFLRRKCV TGCIFAPYFD HADQGTARFA VVHKVFGASN  60
VSKLLLNIPP HKRLDAVATI CYEAQTRFRD PVYGCVAHIF TLQQQVMIDC MQFLIIFLFK  120
IYFSLCFYI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45420.12e-44LBD family protein