PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA60088.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family ERF
Protein Properties Length: 207aa    MW: 22553.3 Da    PI: 6.9504
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA60088.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2561e-1758107255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                  ykGVr++  + rWv+e+r+p   +k+ r++lg+f tae+Aa+a++ a+ +l+g
  PKA60088.1  58 LYKGVRRRN-SDRWVCEVREP---NKKSRIWLGTFPTAEMAARAHDVAAIALRG 107
                 69****888.8******9998...347*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 207 aa     Download sequence    
MNGSEPAAAG VSIRASNSPR PAAPGGAVSD EEAYLTVSSA PPKRRAGRTK FRETRHPLYK  60
GVRRRNSDRW VCEVREPNKK SRIWLGTFPT AEMAARAHDV AAIALRGRAA CLNFADSAWR  120
LPVPESSSPH DIQRAAIAAA EAFRPQPPSA PVDKRELFEV EDRLSLGMQV YWEMAEGLLI  180
DPPPMQAPED DDSGGSDGDV SLWSHSI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51990.12e-58ERF family protein