PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA60098.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

WOX

Protein Properties

Length: 245aa MW: 27748.2 Da PI: 8.1947

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA60098.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	65.2	8.9e-21	101	161	2	57
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 r+R+t+t+ ql++Le lFe+ n +ps+++++ ++++l +++e++V++WFqNrRa+ k+ PKA60098.1 101 RQRWTPTPMQLQILEGLFEQgNGTPSKQKIKGITSELskhgQVSEANVYNWFQNRRARTKR 161 89***************99************************************97 PP
2	Wus_type_Homeobox	99.9	1.9e-32	100	163	2	65
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ar+RWtPtp Q++iLe l+++G tP+k++i+ it+eL+++G+++++NV++WFQNr+aR ++kq PKA60098.1 100 ARQRWTPTPMQLQILEGLFEQGNGTPSKQKIKGITSELSKHGQVSEANVYNWFQNRRARTKRKQ 163 689***********************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 245 aa Download sequence
MAWEKGCSSN GKDYYGWSYE EERGRGQWQG LPEGLLCVKV MTDEQMEVLR RQIAVYATIC 60 EQLVEMHRAF SAKQESITGI WSGSIYCDPS SSVGFPKISA RQRWTPTPMQ LQILEGLFEQ 120 GNGTPSKQKI KGITSELSKH GQVSEANVYN WFQNRRARTK RKQASQVQSN TESETEAEVE 180 SPNDVMKKPK LDKEGLHYSN EVARSSGCNE NAVSNPRIKQ MIGKMEIPGY FSHFQNEKGF 240 NFSGL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	155	163	RRARTKRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35550.1	4e-61	WOX family protein