PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA60108.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family NAC
Protein Properties Length: 262aa    MW: 30055 Da    PI: 6.311
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA60108.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM91.11.9e-283011050128
         NAM  50 kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128
                  +k +e+ewyfF++rd++ a+g r+nr+t++g+Wkatg+d+++ s+   ++l+glkk+Lv+y+gr p+g+ktdWvm+eyrl
  PKA60108.1  30 LAKIGEREWYFFVPRDRRPASGGRPNRTTERGFWKATGSDRPIRSAadPRRLIGLKKILVYYRGRGPRGRKTDWVMNEYRL 110
                 3456899*************************************98777788***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 262 aa     Download sequence    
MLKEKNNFPY LVQLLRSPFY NEESMLQYTL AKIGEREWYF FVPRDRRPAS GGRPNRTTER  60
GFWKATGSDR PIRSAADPRR LIGLKKILVY YRGRGPRGRK TDWVMNEYRL PDVHNELSAA  120
PPLPPMKRQE DVVLCKVYRK ATSMRELEQR AAMEQDDGAS AMAETASPSD QGNFSESFFA  180
LDDVVAEIKE ERVDVAAPES TAPDILPEEL PETPATRQLP SLPAIQVPSH GNFDWIHDAF  240
VTQLRSPWLD QWSPLYAQLL NF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17040.12e-55NAC family protein