PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA60170.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

G2-like

Protein Properties

Length: 124aa MW: 13731.7 Da PI: 11.1356

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA60170.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	89.6	2.9e-28	64	113	2	51
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51 rlrWtp+LH +Fv+av++LGG+++AtPk +l++m+vkgL+++hvkSHLQ PKA60170.1 64 RRLRWTPNLHLSFVRAVDRLGGQDRATPKLVLQMMNVKGLSIAHVKSHLQ 113 69************************************************ PP
2	Myb_DNA-binding	45.3	2e-14	65	113	1	45
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwq 45 r+rWT+ +++ +v+av +lGg t+k++ ++m+ kg++ ++ks++q PKA60170.1 65 RLRWTPNLHLSFVRAVDRLGGQdraTPKLVLQMMNvKGLSIAHVKSHLQ 113 89**********************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 124 aa Download sequence
MRSKKKDKAL EINDKEEKKE GSSGGKKLPN SDSKGDDTGS RKSVVEGKDS PKTITGGQSR 60 LNMRRLRWTP NLHLSFVRAV DRLGGQDRAT PKLVLQMMNV KGLSIAHVKS HLQVKINSFF 120 STAN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42660.1	1e-28	G2-like family protein