PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA60260.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

NAC

Protein Properties

Length: 235aa MW: 27174.3 Da PI: 9.8105

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA60260.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	123.6	1.6e-38	14	153	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk.........kvka..eekewyfFskrdkkyatgkrknra...tksgyWka 85 lppGfrF+Ptdeelvv+yL++k+ + +l++ +i+e+d+ k++PwdLp + + + e y+F +r+kk+ +++r+ + ++sgyWka PKA60260.1 14 LPPGFRFQPTDEELVVQYLRRKALSCPLPA-CIIPEIDLRKYDPWDLPIgirvlicsmS--GyfGG-ERYYFYHREKKNVEKTRRGKYyqpASSGYWKA 108 79***********************999.78***********54777765321..23233.55666666666666666666433466** PP NAM 86 tgkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128 gk+k+vl++ ++e+vg+k+ Lvf+ g+ ++g ktdW+mhey l PKA60260.1 109 VGKEKQVLASrsNEEVVGTKQELVFFIGKLHRGLKTDWIMHEYCL 153 ****98777888*************************87 PP

Sequence ? help Back to Top
Protein Sequence Length: 235 aa Download sequence
MERKEFMKLG SVRLPPGFRF QPTDEELVVQ YLRRKALSCP LPACIIPEID LRKYDPWDLP 60 IGIRVLICSM SGYFGGERYY FYHREKKNVE KTRRGKYYQP ASSGYWKAVG KEKQVLASRS 120 NEEVVGTKQE LVFFIGKLHR GLKTDWIMHE YCLSDTKVPK SINLDFFASS KEWVVCRIMD 180 KRRTRKQRAK GTRDQQQNRV PPLSPSSSSS SCITDICDKE FINGEEAVSN ALIAS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G13180.1	9e-49	NAC family protein