PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA60432.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family MYB_related
Protein Properties Length: 284aa    MW: 31341.4 Da    PI: 7.5477
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA60432.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding431e-133983147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     r +WT++E++++++a +++  + Wk+I + +g  +t  q++s+ qky
       PKA60432.1 39 RESWTEQEHDKFLEALQLFDRD-WKKIGAFIG-SKTVIQIRSHAQKY 83
                     789*****************77.*********.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 284 aa     Download sequence    
MAMVVPEMME TSASAAAAEV SAEDPSKKIR KPYTITKSRE SWTEQEHDKF LEALQLFDRD  60
WKKIGAFIGS KTVIQIRSHA QKYFLKVQKN GTSEHVPPPR PKRKAAHPYP QKASKNVHHE  120
SQHATPFQTS LCTLEPGYAL RSDTPSKLGK SNASGKLSSC ASIQPNVSSQ MTKEEVAPTG  180
AMLNNCCSSS STENAPTTGQ SCETTDQVLD IPSHRAMPDF AQVYSFIGTV FDPSTCDHFH  240
KLKEMDPIDV EAVLLLMRNL SINLGNPDSE DHRKILSSYN CLCG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01280.18e-84MYB_related family protein