PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA60447.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family NAC
Protein Properties Length: 331aa    MW: 37406.2 Da    PI: 4.9884
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA60447.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM177.43.9e-5581371129
         NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 
                 +ppGfrFhPtdeelv +yLkkkv+++k++l +vi++vd+y++ePwdL++  ++   e++ewyfFs++dkky+tg+r+nrat +g+Wkatg+dk+v++ k
  PKA60447.1   8 VPPGFRFHPTDEELVGYYLKKKVASQKIDL-DVIRDVDLYRIEPWDLQEqcRIGYeEQTEWYFFSHKDKKYPTGTRTNRATMAGFWKATGRDKAVHD-K 104
                 69****************************.9***************953433332667**************************************.9 PP

         NAM  97 gelvglkktLvfykgrapkgektdWvmheyrle 129
                 ++l+g++ktLvfykgrap+g+ktdW++heyrle
  PKA60447.1 105 QKLIGMRKTLVFYKGRAPNGQKTDWIIHEYRLE 137
                 99*****************************85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 331 aa     Download sequence    
MESMESCVPP GFRFHPTDEE LVGYYLKKKV ASQKIDLDVI RDVDLYRIEP WDLQEQCRIG  60
YEEQTEWYFF SHKDKKYPTG TRTNRATMAG FWKATGRDKA VHDKQKLIGM RKTLVFYKGR  120
APNGQKTDWI IHEYRLESED NVGAAPQEEG WVVCRAFKKR INCLKTRSIA EALEHSNYYA  180
FVHRLASSSR PSAIVDPLEY LHGRPPENLY SLKQESELEG LALLQPAASS FVQLPQLASP  240
SLPLISVASE NDDDELAGVG CSAGERVTDW RALDKFVASQ LMISQEDGFV GGLVCEGEVS  300
EMGLLLVDDQ NGRGEETKMN EGGFAFCVFE K
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36160.11e-113NAC family protein