PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA60469.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family bHLH
Protein Properties Length: 86aa    MW: 9626.93 Da    PI: 7.3643
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA60469.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.31.6e-0912521454
                HHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH 14 driNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                d+iN+ +++L++llP+a + + ++ s +  L+++++YIksL
  PKA60469.1 12 DEINELISKLQSLLPEARRSSVGRASASKLLKETCNYIKSL 52
                78**************889*********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 86 aa     Download sequence    
MMSSRRSRIT EDEINELISK LQSLLPEARR SSVGRASASK LLKETCNYIK SLHREVDDLS  60
DRLSGLMASM DTNSAEAEIV RSLLQS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26945.14e-27bHLH family protein