PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA60476.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family NF-YB
Protein Properties Length: 205aa    MW: 22202.6 Da    PI: 7.0594
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA60476.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB1771.8e-5529124297
       NF-YB   2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97 
                 +eqdrflPianvsrimk+ lPan kiskdaketvqecvsefisf+t+easdkcqrekrktingddllwa++tlGf+ yv plk+yl++yre+egek
  PKA60476.1  29 KEQDRFLPIANVSRIMKRSLPANVKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFDSYVVPLKTYLNRYRETEGEK 124
                 89********************************************************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 205 aa     Download sequence    
MKGRKGTDPQ QLLIPTGSPQ SDNDAGLSKE QDRFLPIANV SRIMKRSLPA NVKISKDAKE  60
TVQECVSEFI SFITGEASDK CQREKRKTIN GDDLLWAMTT LGFDSYVVPL KTYLNRYRET  120
EGEKNTISRQ PQPADHDQAS LSEDGSGAAA AAAATVVDGG FYSELWSSNH NEKVGGHGLF  180
GRTAAGNHPG GRAAVPSHLR GADQW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G14540.18e-63NF-YB family protein