PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA60697.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family C3H
Protein Properties Length: 205aa    MW: 22601.7 Da    PI: 7.9429
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA60697.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH27.55.4e-0982102626
                 -SGGGGTS--TTTTT-SS-SS CS
     zf-CCCH   6 CrffartGtCkyGdrCkFaHg 26 
                 C+ f++ G+C++G +C FaHg
  PKA60697.1  82 CPEFRQAGECRRGQNCEFAHG 102
                 ********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 205 aa     Download sequence    
MEVYAAYLRL AGGLSGGGDN EEKSIKAAAA AEAADEFLMY TYKVRRCQKA KSHDWTACPY  60
AHHGEKARRR DPRKFPYHGI ACPEFRQAGE CRRGQNCEFA HGTFEFWLHP TRYRTRVCEA  120
GIVCPRRVCF FAHTPEQLRP EVIRDCFKCE LRGHAVVAGK EAPVTVGCCG GGAASRFPLS  180
CCPSAGLGGE EEGSPDIAWV VDLVT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41900.11e-51C3H family protein