PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA60720.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

DBB

Protein Properties

Length: 202aa MW: 22500.8 Da PI: 8.2257

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA60720.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	23.7	9.9e-08	4	34	5	35
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHk 35 +C+ +e+ ++ lfC ++ lC+ C ++ Hk PKA60720.1 4 ICDVCESAPAVLFCAADEAALCRPCDDKVHK 34 8***************************995 PP
2	zf-B_box	24.7	5e-08	52	86	2	36
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHkg 36 e ++C+ +e ++ +fCe +++ lC +C + H g PKA60720.1 52 EVPRCDICETSPAFFFCEIDGSSLCLQCDTIVHVG 86 789**************************999955 PP

Sequence ? help Back to Top
Protein Sequence Length: 202 aa Download sequence
MRIICDVCES APAVLFCAAD EAALCRPCDD KVHKCNKLAS RHVRVGLADP SEVPRCDICE 60 TSPAFFFCEI DGSSLCLQCD TIVHVGGKRT HARYLLLRQA VQVLLLVSLI LTQGIKLKIT 120 NHFSFQTEAH LSKPVARERQ QNREGSGPPA FDANGDNHGS ANSKMFDLNA RPTRTHYQAS 180 NTQASFSFRR SFLMHDSFKM FL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38960.1	1e-59	DBB family protein