PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA60951.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family B3
Protein Properties Length: 214aa    MW: 23577.1 Da    PI: 8.3428
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA60951.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B344.72.4e-14401061383
                 TT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEE CS
          B3  13 sgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFk 83 
                 +  lv+pkkf+ ++ +++     + l+ +sg+ W v l  rk+ +r  l+ GW++F ++++++e+D++  +
  PKA60951.1  40 KFGLVIPKKFM-DYFSVE-LLEAVELKVPSGNIWHVSL--RKTNDRAALECGWRKFIEDHDIQENDTLDVM 106
                 5679*******.776665.5569***************..**************************98555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 214 aa     Download sequence    
MNSCTSLLPH PFVFTSKRAR SASAFSQSRA AEGESSLVLK FGLVIPKKFM DYFSVELLEA  60
VELKVPSGNI WHVSLRKTND RAALECGWRK FIEDHDIQEN DTLDVMVVVE VRLMIMGMKE  120
THFPPNHTMA TVTAIMIDVE RSSTILTCFL KYARNKMLFS SLDSSPLLCG TKANNSVSPV  180
DGTGGMSGTN GGGRRGGQLA WVAIRRSRGE AEET
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.11e-09B3 family protein