PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA61000.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

C2H2

Protein Properties

Length: 291aa MW: 32294.1 Da PI: 8.2888

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA61000.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15.8	3.9e-05	261	282	3	23
ETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 3 CpdCgksFsrksnLkrHirt.H 23 Cp C+k F+++ +L+ H + H PKA61000.1 261 CPRCSKAFRDPVLLVEHVEKdH 282 *****************99888 PP

Sequence ? help Back to Top
Protein Sequence Length: 291 aa Download sequence
MGSSVMADLG RHCSVEECKL VDFLPFTCDR CKQVFCLQHR SCTKHQCRNA HQMDVTILIC 60 PLCAQGVRLI PNEDPNITWD NHVNCDCDPS NYQKATKKKY CPVLGCKETL VFSNKIRCRD 120 CNQEHCLRHR FGPDHNCLGS KKTEIGFPFI NVLRRSQKGE PTIQTSLGSP KWGSSLLNAA 180 SSIKASAEAG MQKLSNATNQ ALRKAKDGMG QGSGAGAYLV EQCLLCRARF SEVTALVEHV 240 EEVHERKNVH RAYCGATIDF CPRCSKAFRD PVLLVEHVEK DHGGAIVGRA C

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G41835.1	1e-102	C2H2 family protein